PPDB

The Plant Proteome Database

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AT5G64180.1   tropomyosin

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64180.2 11Arabidopsis thaliana3E-1101581001000 (0)_
Os12g31790.1 7Oryza sativa1E-4613868894 (4)_
GRMZM2G009795_P01 3.21Zea mays1E-4814564870 (0)C
Zm00001eb409430_P002 agpv5Zea mays1E-4814564870 (0)C
v1_GRMZM2G009795_P01 4a53Zea mays1E-4814564870 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_13(1) Alanine_zipper(1) Allexi_40kDa(1) Ax_dynein_light(2) BLOC1_2(2) CENP-F
TargetP: Cytoplasm (Class 1 C0.052; M0.080; S0.061; _0.947)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 158 aa (-cTP 111)
Molecular Weight 17.80 kDA(-cTP )
PI 5.41(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help