PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G64110.1   Peroxidase superfamily protein

Lab Annot. peroxidase, putative
Mapman: 26.12 misc.peroxidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64100.1 11Arabidopsis thaliana5E-145328657418 (18)S
AT5G64120.1 11Arabidopsis thaliana6E-126297627413 (11)S
AT2G41480.1 11Arabidopsis thaliana7E-11832951680 (0)S
Os01g07770.1 7Oryza sativa4E-10132649630 (0)S
Os05g41990.1 7Oryza sativa1E-8230046610 (0)S
Os07g01370.1 7Oryza sativa7E-8130046600 (0)M
GRMZM2G104109_P01 3.21Zea mays3E-8030344590 (0)S
Zm00001eb281180_P001 agpv5Zea mays3E-8030344590 (0)S
v1_GRMZM2G104109_P01 4a53Zea mays3E-8030344590 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: peroxidase(1)
TargetP: Secreted (Class 3 C0.009; M0.183; S0.709; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 330 aa (-cTP 279)
Molecular Weight 36.14 kDA(-cTP )
PI 6.52(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
311Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-his6
324Detail       leaf [A. thaliana] cell wall enriched wild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1908Detail       leaf [A. thaliana] total leaf tissue clb19_myc

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19888209(leaves)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help