PPDB

The Plant Proteome Database

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AT5G64080.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin protein
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64080.2 11Arabidopsis thaliana1E-11718297978 (8)S
AT2G13820.3 11Arabidopsis thaliana7E-4518249650 (0)S
AT2G13820.1 11Arabidopsis thaliana1E-4417250660 (0)S
Os03g09230.1 7Oryza sativa1E-2611449620 (0)S
Os03g09230.2 7Oryza sativa3E-269553690 (0)S
Os03g26820.1 7Oryza sativa7E-14116396276 (76)S
GRMZM2G004466_P01 3.21Zea mays6E-2211440580 (0)M
v1_GRMZM2G004466_P01 4a53Zea mays6E-2211440580 (0)M
Zm00001eb401230_P001 agpv5Zea mays6E-2211440580 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Hydrophob_seed(2) LTP_2(1) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 1 C0.070; M0.019; S0.879; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 182 aa (-cTP 162)
Molecular Weight 17.97 kDA(-cTP )
PI 6.47(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
2193Detail        [A. thaliana] total soluble P3-strepII 26
2225Detail       leaf [A. thaliana] total leaf tissue Clp P3 trap
2247Detail       seedlings [A. thaliana] total tissue atg5
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

14517339(GPI anchored suspension cells)
21173025(root proteome)

Comparative Proteomics Data


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