PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G64030.1   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Lab Annot. S-adenosyl-L-methionine-dependent methyltransferases protein
Mapman: 20.2.3 stress.abiotic.drought/salt
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G29470.2 11Arabidopsis thaliana0834587155 (49)M
AT1G29470.1 11Arabidopsis thaliana0834587155 (49)M
AT2G34300.3 11Arabidopsis thaliana083157710 (0)S
Os01g66110.2 7Oryza sativa0831597322 (22)M
Os01g66110.1 7Oryza sativa0831597322 (22)M
Os11g08314.1 7Oryza sativa087554650 (0)M
GRMZM2G049269_P01 3.21Zea mays0847607225 (25)C
Zm00001eb366080_P002 agpv5Zea mays084760720 (0)C
Zm00001eb366080_P001 agpv5Zea mays084760720 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Methyltransf_11(2) Methyltransf_12(2) Methyltransf_23(2) Methyltransf_25(2) Meth
TargetP: Mitochondria (Class 2 C0.043; M0.818; S0.081; _0.128)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 829 aa (-cTP 790)
Molecular Weight 93.05 kDA(-cTP )
PI 5.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2013Detail       leaf [A. thaliana] total leaf tissue wt

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(Golgi)
19200160(flower-stage 12)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
21826108(SYP trans-Golgi-filtered)
21173025(root proteome)
22430844(Golgi-cell-culture)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help