PPDB

PPDB	The Plant Proteome Database

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AT5G63960.1 DNA polymerase delta subunit 1

Lab Annot.

DNA-directed DNA polymerase (EMB2780)
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G63960.2 11 Arabidopsis thaliana 0 1112 98 98 2 (1) M
AT1G67500.7 11 Arabidopsis thaliana 2E-84 852 28 45 0 (0) _
AT1G67500.2 11 Arabidopsis thaliana 2E-84 852 28 45 3 (3) _
Os11g08330.1 7 Oryza sativa 0 1062 82 90 6 (6) M
Os01g64820.1 7 Oryza sativa 1E-44 670 26 46 0 (0) C
Zm00001eb201340_P002 agpv5 Zea mays 0 1058 81 89 0 (0) M
Zm00001eb201340_P001 agpv5 Zea mays 0 1060 81 89 0 (0) M
GRMZM2G115245_P01 3.21 Zea mays 0 373 84 91 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CEBP_ZZ(2) DNA_pol_B(1) DNA_pol_B_2(2) DNA_pol_B_exo1(1) zf-C4pol(1)
TargetP:	Mitochondria (Class 5 C0.204; M0.402; S0.071; _0.302)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1095 aa (-cTP 1071)
Molecular Weight	123.23 kDA(-cTP )
PI	8.00(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data