PPDB

The Plant Proteome Database

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AT5G63960.1   DNA polymerase delta subunit 1

Lab Annot. DNA-directed DNA polymerase (EMB2780)
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63960.2 11Arabidopsis thaliana0111298982 (1)M
AT1G67500.7 11Arabidopsis thaliana2E-8485228450 (0)_
AT1G67500.2 11Arabidopsis thaliana2E-8485228453 (3)_
Os11g08330.1 7Oryza sativa0106282906 (6)M
Os01g64820.1 7Oryza sativa1E-4467026460 (0)C
Zm00001eb201340_P002 agpv5Zea mays0105881890 (0)M
Zm00001eb201340_P001 agpv5Zea mays0106081890 (0)M
GRMZM2G115245_P01 3.21Zea mays037384911 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CEBP_ZZ(2) DNA_pol_B(1) DNA_pol_B_2(2) DNA_pol_B_exo1(1) zf-C4pol(1)
TargetP: Mitochondria (Class 5 C0.204; M0.402; S0.071; _0.302)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1095 aa (-cTP 1071)
Molecular Weight 123.23 kDA(-cTP )
PI 8.00(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2013Detail       leaf [A. thaliana] total leaf tissue wt

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help