PPDB

PPDB	The Plant Proteome Database

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AT5G63950.1 chromatin remodeling 24

Lab Annot.

CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G63950.2 11 Arabidopsis thaliana 0 1090 98 98 0 (0) M
AT2G18760.2 11 Arabidopsis thaliana 3E-102 673 34 51 0 (0) _
AT2G18760.6 11 Arabidopsis thaliana 3E-102 673 34 51 0 (0) _
Os04g59624.3 7 Oryza sativa 0 721 61 75 0 (0) _
Os04g59624.2 7 Oryza sativa 0 721 61 75 0 (0) _
Os04g59624.1 7 Oryza sativa 0 588 61 75 0 (0) _
GRMZM2G138125_P03 3.21 Zea mays 0 564 67 79 0 (0) _
v1_GRMZM2G138125_P01 4a53 Zea mays 0 719 61 75 0 (0) _
Zm00001eb076670_P001 agpv5 Zea mays 0 719 61 75 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_34(1) GCOM2(1) Helicase_C(1) ResIII(1) SNF2_N(1)
TargetP:	Mitochondria (Class 4 C0.262; M0.597; S0.021; _0.180)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1090 aa (-cTP 1055)
Molecular Weight	122.80 kDA(-cTP )
PI	5.99(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
355	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
1413	Detail								leaf [A. thaliana]	total leaf tissue -114 rep1tR1	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (Gamborg))
16502469(cell suspension-Cd-up)

Comparative Proteomics Data