PPDB

The Plant Proteome Database

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AT5G63920.1   topoisomerase 3alpha

Lab Annot.
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G32000.1 11Arabidopsis thaliana3E-12164036540 (0)S
AT2G32000.2 11Arabidopsis thaliana3E-10554536550 (0)S
AT4G31210.2 11Arabidopsis thaliana1E-2060522390 (0)C
Os03g06900.1 7Oryza sativa077167780 (0)C
Os09g32450.1 7Oryza sativa7E-12063835530 (0)C
Os06g16980.2 7Oryza sativa5E-0730823398 (8)M
v1_GRMZM2G470438_P02 4a53Zea mays092168790 (0)C
Zm00001eb005010_P001 agpv5Zea mays092168790 (0)C
GRMZM2G470438_P02 3.21Zea mays092168790 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Topoisom_bac(1) Toprim(1) zf-C4_Topoisom(2) zf-CCHC(3) zf-CCHC_3(2) zf-CCHC_5(2)
TargetP: Mitochondria (Class 5 C0.395; M0.422; S0.037; _0.245)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 926 aa (-cTP 906)
Molecular Weight 103.41 kDA(-cTP )
PI 7.47(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help