PPDB

 The Plant Proteome Database

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AT5G63780.1   RING/FYVE/PHD zinc finger superfamily protein
Lab Annot. E3 ring finger ligase - SHOOT APICAL MERISTEM ARREST 1 (SHA1)
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63780.2 11Arabidopsis thaliana03671001000 (0)_
AT5G08750.1 11Arabidopsis thaliana036671790 (0)_
AT5G08750.9 11Arabidopsis thaliana036671790 (0)_
Os04g59580.1 7Oryza sativa6E-10335948610 (0)_
Os06g46366.1 7Oryza sativa6E-0812227480 (0)_
Os05g11720.1 7Oryza sativa6E-085547540 (0)_
GRMZM5G864693_P03 3.21Zea mays1E-9834147600 (0)_
Zm00001eb434500_P001 agpv5Zea mays1E-9834147600 (0)_
GRMZM5G864693_P02 3.21Zea mays1E-8030446580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4173(1) MNHE(1) PIG-P(2) RINGv(2) zf-RING_2(1)
TargetP: Cytoplasm (Class 3 C0.305; M0.057; S0.033; _0.888)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 367 aa (-cTP 335)
Molecular Weight 40.11 kDA(-cTP )
PI 5.42(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help