PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G63680.1   Pyruvate kinase family protein
Lab Annot. pyruvate kinase
Mapman: 4.13 glycolysis.PK
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63680.3 11Arabidopsis thaliana05101001000 (0)_
AT5G63680.2 11Arabidopsis thaliana05101001000 (0)_
AT5G08570.1 11Arabidopsis thaliana0510929787 (60)_
Os04g58110.1 7Oryza sativa0511839054 (54)_
Os01g16960.1 7Oryza sativa049077886 (6)C
Os01g16960.2 7Oryza sativa038476881 (1)S
Zm00001eb066190_P003 agpv5Zea mays046785920 (0)_
Zm00001eb128890_P001 agpv5Zea mays049976860 (0)C
GRMZM2G003883_P01 3.21Zea mays04997686106 (29)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HpcH_HpaI(2) PK(1) PK_C(1) YjdM(1)
TargetP: Cytoplasm (Class 3 C0.320; M0.061; S0.040; _0.866)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 510 aa (-cTP 467)
Molecular Weight 55.02 kDA(-cTP )
PI 6.24(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2013Detail       leaf [A. thaliana] total leaf tissue wt
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 16358359(cell suspension (M&Skoog))
16502469(cell suspension-Cd-up)
17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19714877(interactomes 14-3-3 complexes (cell culture))
19508356(mature pollen grains and pollen tubes)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help