PPDB

PPDB	The Plant Proteome Database

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AT5G63630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DEAD box RNA helicase (RH31)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G63630.2 11 Arabidopsis thaliana 0 522 100 100 0 (0) M
AT5G08610.1 11 Arabidopsis thaliana 0 505 81 90 70 (68) C
AT5G08620.1 11 Arabidopsis thaliana 0 474 81 90 0 (0) _
Os01g43120.1 7 Oryza sativa 0 482 71 84 37 (37) C
Os06g33520.1 7 Oryza sativa 0 497 69 82 3 (3) M
Os01g43130.1 7 Oryza sativa 0 473 72 84 4 (4) _
GRMZM2G041732_P01 3.21 Zea mays 0 519 71 83 5 (5) M
Zm00001eb383060_P004 agpv5 Zea mays 0 519 71 83 0 (0) M
v1_GRMZM2G041732_P01 4a53 Zea mays 0 519 71 83 9 (9) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(1) Helicase_C(2) ResIII(1)
TargetP:	Cytoplasm (Class 2 C0.143; M0.084; S0.076; _0.938)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	522 aa (-cTP 494)
Molecular Weight	58.54 kDA(-cTP )
PI	8.83(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data