PPDB

PPDB	The Plant Proteome Database

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AT5G63620.1 GroES-like zinc-binding alcohol dehydrogenase family protein

Lab Annot.

oxidoreductase, zinc-binding dehydrogenase protein
Mapman: 35.1 not assigned.no ontology

Curated Location

not plastid (supported by in-house exprements)

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G63620.2 11 Arabidopsis thaliana 0 427 99 99 58 (39) M
AT5G63620.3 11 Arabidopsis thaliana 0 307 100 100 0 (0) M
AT1G64710.1 11 Arabidopsis thaliana 1E-45 368 29 47 39 (12) _
Os08g01760.1 7 Oryza sativa 0 392 72 85 9 (9) M
Os07g42924.1 7 Oryza sativa 1E-40 368 30 46 0 (0) C
Os11g10510.1 7 Oryza sativa 2E-38 371 29 47 0 (0) _
v1_GRMZM2G135526_P02 4a53 Zea mays 0 372 75 87 0 (0) _
GRMZM2G135526_P02 3.21 Zea mays 0 372 75 87 0 (0) _
Zm00001eb174190_P001 agpv5 Zea mays 0 405 72 85 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	2-Hacid_dh_C(1) ADH_N(1) ADH_zinc_N(1) ADH_zinc_N_2(1) AlaDh_PNT_C(1) F420_oxido
TargetP:	Mitochondria (Class 2 C0.067; M0.733; S0.120; _0.012)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	427 aa (-cTP 418)
Molecular Weight	45.50 kDA(-cTP )
PI	7.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1516	Detail								leaf [A. thaliana]		wild-type
1517	Detail								leaf [A. thaliana]		wild-type
1520	Detail								leaf [A. thaliana]		wild-type
1523	Detail								leaf [A. thaliana]		wild-type
1524	Detail								leaf [A. thaliana]		wild-type
1541	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	M-48
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2028	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type
2272	Detail								seedlings [A. thaliana]	total tissue	wild-type
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2275	Detail								seedlings [A. thaliana]	total tissue	wild-type
2287	Detail								[A. thaliana]		Clp C1 WT
2290	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2311	Detail								leaf [A. thaliana]	PG plastoglobule
2313	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2316	Detail								leaf [A. thaliana]	PG plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
20018591(Co2+ binding (mitochondria - cell culture))
20018591(Zn2+ binding (mitochondria - cell culture))
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)

Comparative Proteomics Data