PPDB

The Plant Proteome Database

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AT5G63550.1   DEK domain-containing chromatin associated protein

Lab Annot. DEK domain-containing chromatin associated protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63550.2 11Arabidopsis thaliana053199990 (0)_
AT3G48710.1 11Arabidopsis thaliana7E-15948856702 (2)_
AT5G55660.1 11Arabidopsis thaliana4E-43166487118 (14)_
Os01g70020.1 7Oryza sativa8E-84459405618 (18)_
Os03g40010.1 7Oryza sativa2E-0999366028 (28)_
Zm00001eb142940_P001 agpv5Zea mays2E-7842342590 (0)_
v1_GRMZM2G139617_P01 4a53Zea mays2E-78423425947 (47)_
GRMZM2G139617_P01 3.21Zea mays2E-78423425923 (23)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DEK_C(2) DUF4777(1) DUF4974(1)
TargetP: Cytoplasm (Class 2 C0.138; M0.099; S0.074; _0.928)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 530 aa (-cTP 506)
Molecular Weight 59.43 kDA(-cTP )
PI 5.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help