PPDB

 The Plant Proteome Database

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AT5G63500.1   transmembrane protein%2C putative (DUF 3339)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G48660.1 11Arabidopsis thaliana1E-376986950 (0)S
AT3G27027.1 11Arabidopsis thaliana1E-266666830 (0)S
AT5G08391.1 11Arabidopsis thaliana2E-266956810 (0)S
Os11g30360.1 7Oryza sativa5E-316971850 (0)S
Os02g30470.1 7Oryza sativa2E-306971860 (0)S
Os01g69890.1 7Oryza sativa2E-306771860 (0)S
Zm00001eb169420_P001 agpv5Zea mays2E-306968850 (0)S
GRMZM2G150691_P01 3.21Zea mays2E-306968850 (0)S
Zm00001eb241780_P001 agpv5Zea mays2E-306971860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3339(1) RAMP4(1)
TargetP: Secreted (Class 1 C0.003; M0.019; S0.990; _0.084)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 69 aa (-cTP 43)
Molecular Weight 7.33 kDA(-cTP )
PI 5.95(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help