PPDB

The Plant Proteome Database

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AT5G63460.1   SAP domain-containing protein

Lab Annot. SAP domain-containing protein
Mapman: 28.99 DNA.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63460.2 11Arabidopsis thaliana2E-11116299997 (7)C
AT5G63460.4 11Arabidopsis thaliana2E-10917492936 (6)C
AT5G63460.3 11Arabidopsis thaliana3E-256586926 (6)C
Os11g29340.1 7Oryza sativa4E-3916149650 (0)C
Os12g25640.1 7Oryza sativa5E-3814950630 (0)_
Zm00001eb169640_P001 agpv5Zea mays2E-4216150620 (0)_
v1_GRMZM2G160041_P01 4a53Zea mays2E-4216150621 (1)_
v1_GRMZM2G160041_P02 4a53Zea mays2E-4216150621 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DDA1(1) HeH(1) Ish1(1) SAP(1) SAP_new25(1)
TargetP: Chloroplast (Class 3 C0.877; M0.041; S0.020; _0.352)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 162 aa (-cTP 128)
Molecular Weight 17.55 kDA(-cTP 14.02)
PI 9.85(-cTP 10.10)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1332Detail       leaf [A. thaliana] chloroplast thylakoid membraneshoot1
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1744Detail        [A. thaliana] Mep-6
1745Detail        [A. thaliana] Col-0
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help