PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G63280.1 C2H2-like zinc finger protein

Lab Annot.

Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G40710.1 11 Arabidopsis thaliana 3E-105 275 54 72 0 (0) S
AT5G40710.2 11 Arabidopsis thaliana 3E-78 199 56 73 0 (0) S
Os12g13130.4 7 Oryza sativa 1E-117 271 58 75 0 (0) M
Os12g13130.3 7 Oryza sativa 1E-117 271 58 75 0 (0) M
Os12g13130.2 7 Oryza sativa 1E-117 271 58 75 0 (0) M
GRMZM2G095323_P03 3.21 Zea mays 4E-119 247 61 79 0 (0) S
Zm00001eb411670_P004 agpv5 Zea mays 4E-119 247 61 79 0 (0) S
v1_GRMZM2G095323_P03 4a53 Zea mays 4E-119 247 61 79 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adipogenin(2) ARS2(1) zf-3CxxC(1) zf-C2H2(1) zf-C2H2_4(1) zf-C2H2_jaz(1)
TargetP:	Secreted (Class 1 C0.015; M0.026; S0.971; _0.031)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	271 aa (-cTP 230)
Molecular Weight	31.28 kDA(-cTP )
PI	8.95(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
21173025(root proteome)

Comparative Proteomics Data