PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G63260.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

Lab Annot.

Zinc finger C-x8-C-x5-C-x3-H type protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G63260.2 11 Arabidopsis thaliana 0 451 96 96 0 (0) C
AT3G48440.1 11 Arabidopsis thaliana 0 425 63 75 0 (0) _
AT3G06410.1 11 Arabidopsis thaliana 4E-69 338 38 53 1 (1) _
Os11g28270.2 7 Oryza sativa 6E-76 338 40 56 0 (0) _
Os11g28270.1 7 Oryza sativa 9E-76 338 40 56 0 (0) S
Os12g21700.1 7 Oryza sativa 9E-76 342 40 55 0 (0) _
v1_GRMZM2G146514_P02 4a53 Zea mays 3E-77 356 39 56 0 (0) _
Zm00001eb169920_P003 agpv5 Zea mays 3E-77 356 39 56 0 (0) _
GRMZM2G146514_P02 3.21 Zea mays 3E-77 356 39 56 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Torus(5) zf-CCCH(5) zf-CCCH_2(5) zf-CCCH_3(5) zf-CCCH_4(5) zf_CCCH_4(5)
TargetP:	Chloroplast (Class 5 C0.698; M0.040; S0.067; _0.597)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	435 aa (-cTP 416)
Molecular Weight	48.61 kDA(-cTP 46.58)
PI	6.25(-cTP 6.50)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data