PPDB

The Plant Proteome Database

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AT5G63220.1   golgi-to-ER traffic-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63220.2 11Arabidopsis thaliana0322991000 (0)_
AT5G63220.3 11Arabidopsis thaliana02901001000 (0)S
Os01g07100.1 7Oryza sativa2E-11631554723 (3)M
GRMZM2G048804_P02 3.21Zea mays1E-139318577616 (14)M
Zm00001eb336250_P004 agpv5Zea mays1E-13731857760 (0)C
Zm00001eb123410_P002 agpv5Zea mays2E-13531855750 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArnB_C(2) DUF410(1) TipAS(2) TPR_19(2)
TargetP: Cytoplasm (Class 3 C0.037; M0.387; S0.030; _0.863)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 324 aa (-cTP 311)
Molecular Weight 37.18 kDA(-cTP )
PI 5.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2290Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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