PPDB

PPDB	The Plant Proteome Database

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AT5G63120.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DEAD box RNA helicase (RH30)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G63120.2 11 Arabidopsis thaliana 0 474 100 100 2 (1) M
AT5G63120.4 11 Arabidopsis thaliana 0 474 100 100 0 (0) M
AT5G63120.3 11 Arabidopsis thaliana 0 474 100 100 0 (0) M
Os01g68320.2 7 Oryza sativa 0 372 77 87 2 (2) C
Os01g68320.1 7 Oryza sativa 0 372 77 87 2 (2) C
Os01g68320.4 7 Oryza sativa 0 366 78 88 2 (2) C
v1_GRMZM2G362850_P02 4a53 Zea mays 0 366 78 88 10 (10) _
GRMZM2G362850_P02 3.21 Zea mays 0 366 78 88 18 (4) _
v1_GRMZM2G143246_P01 4a53 Zea mays 0 391 70 81 3 (3) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_30(1) DEAD(2) Helicase_C(2) ResIII(1)
TargetP:	Mitochondria (Class 4 C0.109; M0.612; S0.021; _0.352)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	484 aa (-cTP 432)
Molecular Weight	53.09 kDA(-cTP )
PI	9.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1018	Detail								[aphid]

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))
21173025(root proteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data