PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G63080.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase protein
Mapman: 27.3.57 RNA.regulation of transcription.JUMONJI family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G78280.1 11Arabidopsis thaliana8E-1828124440 (0)_
AT5G06550.1 11Arabidopsis thaliana9E-1831127422 (2)M
AT3G20810.2 11Arabidopsis thaliana1E-09279264121 (6)_
Os01g36630.1 7Oryza sativa5E-13039150650 (0)_
Os11g36450.1 7Oryza sativa5E-2028429430 (0)C
Os03g27250.1 7Oryza sativa8E-1728927430 (0)_
Zm00001eb342240_P001 agpv5Zea mays8E-16548349660 (0)_
GRMZM2G142964_P03 3.21Zea mays4E-5924244590 (0)S
GRMZM2G142964_P05 3.21Zea mays4E-5924244590 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cupin_4(1) Cupin_8(1) JmjC(1)
TargetP: Cytoplasm (Class 2 C0.098; M0.173; S0.120; _0.845)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 462 aa (-cTP 402)
Molecular Weight 54.36 kDA(-cTP )
PI 4.91(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help