PPDB

The Plant Proteome Database

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AT5G63060.1   Sec14p-like phosphatidylinositol transfer family protein

Lab Annot. chloroplast-localized Sec14-like protein (CPSFL1)
Mapman: 34.99 transport.misc
Curated Location plastid (Pubmed: 23198870 18431481 32245810 ) (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63060.2 11Arabidopsis thaliana3E-16122298990 (0)S
AT4G08690.3 11Arabidopsis thaliana3E-2122025480 (0)_
AT4G08690.1 11Arabidopsis thaliana3E-2122025480 (0)_
Os02g21630.1 7Oryza sativa9E-11026159728 (8)M
Os01g70210.1 7Oryza sativa7E-2515632542 (2)_
Os02g51610.1 7Oryza sativa1E-1819728440 (0)_
GRMZM2G151993_P01 3.21Zea mays2E-11223464782 (2)C
GRMZM2G151993_P03 3.21Zea mays2E-11223464782 (2)C
GRMZM2G151993_P02 3.21Zea mays2E-11223464782 (2)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CRAL_TRIO(1) CRAL_TRIO_2(1)
TargetP: Chloroplast (Class 1 C0.960; M0.068; S0.109; _0.030)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 263 aa (-cTP 232)
Molecular Weight 30.15 kDA(-cTP 26.66)
PI 8.95(-cTP 7.16)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
326Detail       leaf [A. thaliana] chloroplast stromawild-type
420Detail       leaf [A. thaliana] chloroplast stromaclpR1-stop (EMS)
869Detail       leaf [A. thaliana] chloroplast stromawild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


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