PPDB

 The Plant Proteome Database

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AT5G63030.1   Thioredoxin superfamily protein
Lab Annot. glutaredoxin
Mapman: 21.4 redox.glutaredoxins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G40370.1 11Arabidopsis thaliana4E-481076878304 (200)S
AT5G40370.2 11Arabidopsis thaliana2E-4091697898 (65)_
AT5G20500.1 11Arabidopsis thaliana8E-24944364153 (91)S
Os04g42930.1 7Oryza sativa4E-49112637830 (30)C
Os02g40500.1 7Oryza sativa2E-4710666800 (0)C
Os04g42930.2 7Oryza sativa5E-3787647916 (16)C
v1_GRMZM2G148387_P01 4a53Zea mays2E-48109637921 (21)_
Zm00001eb247320_P001 agpv5Zea mays2E-4810963790 (0)_
GRMZM2G148387_P01 3.21Zea mays2E-48109637985 (36)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF836(1) Glutaredoxin(1) GST_N_3(1) Thioredoxin(1) Thioredoxin_2(1) Thioredoxin
TargetP: Cytoplasm (Class 2 C0.127; M0.090; S0.080; _0.870)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 125 aa (-cTP 107)
Molecular Weight 13.61 kDA(-cTP )
PI 5.39(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1618Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 16400686(floem_sap B. napa)
16618929(UNKNOWN-LOPIT-callus)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help