PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G62990.1   Ubiquitin carboxyl-terminal hydrolase family protein

Lab Annot. Ubiquitin carboxyl-terminal hydrolase protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G01037.1 11Arabidopsis thaliana6E-70352385825 (23)C
AT5G48040.1 11Arabidopsis thaliana6E-3440130481 (1)M
AT5G21970.1 11Arabidopsis thaliana2E-3230932490 (0)M
Os04g24710.1 7Oryza sativa3E-9844842620 (0)C
Os05g49610.1 7Oryza sativa2E-6739336548 (8)C
Os01g18880.2 7Oryza sativa2E-4135233490 (0)C
Zm00001eb212420_P003 agpv5Zea mays8E-10348641610 (0)C
Zm00001eb212420_P002 agpv5Zea mays8E-10348641610 (0)C
Zm00001eb212420_P001 agpv5Zea mays8E-10348641610 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PORR(1)
TargetP: Chloroplast (Class 3 C0.687; M0.020; S0.041; _0.107)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 494 aa (-cTP 424)
Molecular Weight 56.79 kDA(-cTP 49.05)
PI 7.60(-cTP 6.09)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help