PPDB

The Plant Proteome Database

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AT5G62950.1   RNA polymerase II%2C Rpb4%2C core protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62950.4 11Arabidopsis thaliana4E-971391001000 (0)_
AT5G62950.7 11Arabidopsis thaliana4E-971391001000 (0)_
AT5G62950.3 11Arabidopsis thaliana4E-971391001000 (0)_
Os12g30510.1 7Oryza sativa1E-3210155672 (2)_
Os12g30510.3 7Oryza sativa2E-319954672 (2)_
Os12g30510.2 7Oryza sativa5E-318760722 (2)_
Zm00001eb076290_P001 agpv5Zea mays2E-3113246610 (0)_
Zm00001eb076270_P001 agpv5Zea mays2E-3113246610 (0)_
Zm00001eb076250_P001 agpv5Zea mays2E-3113246610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNA_pol_Rpb4(1)
TargetP: Cytoplasm (Class 4 C0.047; M0.204; S0.232; _0.472)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 139 aa (-cTP 134)
Molecular Weight 15.46 kDA(-cTP )
PI 4.51(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help