PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G62940.1   Dof-type zinc finger DNA-binding family protein

Lab Annot.
Mapman: 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G60200.1 11Arabidopsis thaliana5E-3419841520 (0)_
AT2G28510.1 11Arabidopsis thaliana3E-315986940 (0)_
AT3G61850.5 11Arabidopsis thaliana1E-3016044560 (0)C
Os02g47810.1 7Oryza sativa2E-4312662690 (0)_
Os03g16850.1 7Oryza sativa7E-307269840 (0)_
Os05g36900.1 7Oryza sativa8E-306576860 (0)C
v1_GRMZM2G140694_P01 4a53Zea mays4E-4513160680 (0)_
Zm00001eb252220_P001 agpv5Zea mays4E-4513160680 (0)_
GRMZM2G140694_P01 3.21Zea mays4E-4513160680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-Dof(1) zf-SNAP50_C(1) zinc_ribbon_9(2)
TargetP: Cytoplasm (Class 5 C0.540; M0.037; S0.035; _0.707)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 372 aa (-cTP 325)
Molecular Weight 39.80 kDA(-cTP )
PI 8.28(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help