PPDB

 The Plant Proteome Database

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AT5G62930.1   SGNH hydrolase-type esterase superfamily protein
Lab Annot. SGNH hydrolase-type esterase protein
Mapman: 26.28 misc.GDSL-motif lipase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62930.2 11Arabidopsis thaliana02421001000 (0)_
AT5G62930.3 11Arabidopsis thaliana4E-138184991000 (0)C
AT5G45920.1 11Arabidopsis thaliana3E-8124250641 (1)_
Os10g33690.1 7Oryza sativa7E-12823870800 (0)C
Os01g11570.1 7Oryza sativa3E-7224049626 (6)_
Os11g48070.1 7Oryza sativa5E-6024539588 (8)S
Zm00001eb087500_P001 agpv5Zea mays5E-12623870790 (0)C
v1_GRMZM2G077863_P01 4a53Zea mays5E-12623870790 (0)C
GRMZM2G077863_P01 3.21Zea mays5E-12623870790 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ALGX(2) Lipase_GDSL(1) Lipase_GDSL_2(1) STELLO(1)
TargetP: Cytoplasm (Class 4 C0.091; M0.342; S0.017; _0.681)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 242 aa (-cTP 152)
Molecular Weight 27.16 kDA(-cTP )
PI 5.99(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help