PPDB

The Plant Proteome Database

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AT5G62910.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62910.2 11Arabidopsis thaliana03271001000 (0)C
AT3G48070.1 11Arabidopsis thaliana1E-11033762710 (0)C
AT3G48070.2 11Arabidopsis thaliana3E-11033762710 (0)C
Os02g37030.1 7Oryza sativa4E-4737436470 (0)_
Os04g38970.1 7Oryza sativa1E-3934134480 (0)C
Os04g38970.2 7Oryza sativa1E-3934134480 (0)C
Zm00001eb080490_P002 agpv5Zea mays6E-3235332430 (0)C
GRMZM2G029001_P01 3.21Zea mays6E-3235332430 (0)C
v1_GRMZM2G029001_P01 4a53Zea mays6E-3235332430 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-C3HC4_3(1) zf-RING_2(1) zf-RING_4(1) zf-UDP(1)
TargetP: Chloroplast (Class 3 C0.882; M0.070; S0.005; _0.420)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 327 aa (-cTP 300)
Molecular Weight 35.98 kDA(-cTP 33.12)
PI 5.72(-cTP 5.25)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help