PPDB

The Plant Proteome Database

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AT5G62890.1   Xanthine/uracil permease family protein

Lab Annot. permease, putative
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62890.2 11Arabidopsis thaliana053210010014 (14)_
AT5G62890.3 11Arabidopsis thaliana05321001009 (9)_
AT5G62890.4 11Arabidopsis thaliana04601001005 (5)_
Os08g32500.1 7Oryza sativa053376880 (0)_
Os02g50820.1 7Oryza sativa052379880 (0)_
Os09g21340.1 7Oryza sativa052775880 (0)_
GRMZM2G115635_P01 3.21Zea mays053374886 (6)_
Zm00001eb042450_P002 agpv5Zea mays053374880 (0)_
v1_GRMZM2G115635_P01 4a53Zea mays053374888 (8)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SpoIIIAC(2) Xan_ur_permease(1)
TargetP: Cytoplasm (Class 2 C0.104; M0.170; S0.070; _0.895)
Predotar:
Subcel. Location:
TM-HMM prediction: 10 TMs
Aramemnon: 12 TMs
TAT position:
Length 532 aa (-cTP 469)
Molecular Weight 57.58 kDA(-cTP )
PI 9.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

15215502(Vacuolar proteome)
16287169(Cell Wall proteome)
18463617(suspension cells-phosphorylated proteins)
19525416(leaf (wt and clpr4-1 mutant))
21533090(plasmodesmata-crude)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


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