PPDB

 The Plant Proteome Database

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AT5G62610.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Lab Annot. basic helix-loop-helix (bHLH) DNA-binding protein
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62610.2 11Arabidopsis thaliana02811001000 (0)C
AT1G59640.1 11Arabidopsis thaliana3E-6227943570 (0)_
AT1G59640.2 11Arabidopsis thaliana2E-5426142580 (0)_
Os07g09590.1 7Oryza sativa2E-5920651630 (0)_
Os03g58830.1 7Oryza sativa9E-5620653650 (0)_
Os01g68700.1 7Oryza sativa5E-4414158680 (0)_
GRMZM2G137358_P01 3.21Zea mays3E-6020553670 (0)C
v1_GRMZM2G137358_P01 4a53Zea mays3E-6020553670 (0)C
Zm00001eb061300_P002 agpv5Zea mays3E-6020553670 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HLH(1)
TargetP: Chloroplast (Class 4 C0.755; M0.044; S0.020; _0.361)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 281 aa (-cTP 222)
Molecular Weight 30.57 kDA(-cTP 24.21)
PI 5.83(-cTP 5.91)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21311031(chloroplasts)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help