PPDB

 The Plant Proteome Database

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AT5G62560.1   RING/U-box superfamily protein with ARM repeat domain-containing protein
Lab Annot. RING/U-box protein with ARM repeat domain
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G47820.1 11Arabidopsis thaliana056269781 (0)M
AT5G65200.1 11Arabidopsis thaliana2E-17156552680 (0)M
AT5G40140.1 11Arabidopsis thaliana2E-9433250660 (0)C
Os06g13080.1 7Oryza sativa1E-6131042590 (0)C
Os06g13090.1 7Oryza sativa3E-4526441610 (0)_
Os09g21740.1 7Oryza sativa2E-4426944620 (0)M
GRMZM2G100090_P01 3.21Zea mays3E-7450935540 (0)M
v1_GRMZM2G100090_P01 4a53Zea mays3E-7450935540 (0)M
Zm00001eb311800_P001 agpv5Zea mays3E-7450935540 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Arm(5) HEAT_2(3) KAP(1) RYDR_ITPR(2) U-box(1)
TargetP: Mitochondria (Class 3 C0.192; M0.772; S0.013; _0.099)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 559 aa (-cTP 545)
Molecular Weight 60.46 kDA(-cTP )
PI 5.56(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help