PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G62380.1   NAC-domain protein 101

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
TAIR curated location: nucleus16103214
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62380.2 11Arabidopsis thaliana03481001000 (0)_
AT1G12260.2 11Arabidopsis thaliana4E-10336248590 (0)_
AT1G12260.1 11Arabidopsis thaliana3E-9940244550 (0)_
Os02g42970.1 7Oryza sativa3E-9320466750 (0)_
Os06g01480.1 7Oryza sativa3E-9137345570 (0)_
Os03g03540.1 7Oryza sativa1E-8830648600 (0)_
Zm00001eb379460_P001 agpv5Zea mays2E-9634947600 (0)M
v1_GRMZM2G440219_P01 4a53Zea mays2E-9634947600 (0)M
GRMZM2G440219_P01 3.21Zea mays2E-9634947600 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NAM(2)
TargetP: Cytoplasm (Class 2 C0.057; M0.175; S0.144; _0.930)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 348 aa (-cTP 319)
Molecular Weight 39.73 kDA(-cTP )
PI 5.14(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help