PPDB

PPDB	The Plant Proteome Database

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AT5G62370.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G65560.1 11 Arabidopsis thaliana 3E-58 701 25 47 0 (0) M
AT5G65560.3 11 Arabidopsis thaliana 3E-58 701 25 47 0 (0) M
AT5G65560.2 11 Arabidopsis thaliana 3E-58 701 25 47 0 (0) M
Os10g02650.1 7 Oryza sativa 2E-132 859 30 52 0 (0) M
Os06g47570.1 7 Oryza sativa 2E-61 730 26 43 0 (0) C
Os03g40690.1 7 Oryza sativa 4E-60 838 23 44 0 (0) M
Zm00001eb049980_P001 agpv5 Zea mays 2E-62 846 23 44 0 (0) _
v1_GRMZM2G393935_P01 4a53 Zea mays 3E-62 846 23 44 0 (0) M
GRMZM2G393935_P01 3.21 Zea mays 3E-62 846 23 44 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(3) ANAPC3(5) DUF3213(1) DUF3368(3) ECSIT(2) MRP-S27(5) PPR(22) PPR_1(20) PP
TargetP:	Chloroplast (Class 5 C0.320; M0.283; S0.035; _0.006)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	982 aa (-cTP 951) (-lTP 868)
Molecular Weight	110.27 kDA(-cTP 106.80)(-lTP 98.12)
PI	7.78(-cTP 6.87)(-lTP 6.856)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data