PPDB

The Plant Proteome Database

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AT5G62260.1   AT hook motif DNA-binding family protein

Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62260.3 11Arabidopsis thaliana04041001000 (0)_
AT5G62260.2 11Arabidopsis thaliana027697980 (0)_
AT4G25320.1 11Arabidopsis thaliana6E-7623554690 (0)_
Os02g03270.1 7Oryza sativa1E-6425751620 (0)_
Os08g02490.1 7Oryza sativa9E-6125852650 (0)_
Os10g42230.2 7Oryza sativa1E-5025144550 (0)C
Zm00001eb230800_P002 agpv5Zea mays7E-5626547600 (0)C
Zm00001eb173650_P002 agpv5Zea mays2E-5424152630 (0)_
v1_GRMZM2G062591_P02 4a53Zea mays2E-5424152631 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AT_hook(1) PCC(1) TALPID3(1) YkpC(4)
TargetP: Cytoplasm (Class 2 C0.159; M0.065; S0.010; _0.837)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 404 aa (-cTP 337)
Molecular Weight 42.80 kDA(-cTP )
PI 6.46(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help