PPDB

 The Plant Proteome Database

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AT5G62200.1   Embryo-specific protein 3%2C (ATS3)
Lab Annot. embryo-specific protein-related
Mapman: 33.99 development.unspecified
Curated Location not plastid (supported by in-house exprements)

TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41475.1 11Arabidopsis thaliana6E-52154516530 (22)S
AT5G62210.1 11Arabidopsis thaliana3E-4411657730 (0)S
AT5G07190.1 11Arabidopsis thaliana3E-37133466610 (6)S
Os01g07780.1 7Oryza sativa1E-3212248620 (0)C
Os05g07890.1 7Oryza sativa7E-2913440584 (4)S
Zm00001eb336790_P001 agpv5Zea mays6E-3113842600 (0)S
GRMZM2G061932_P01 3.21Zea mays6E-31138426013 (7)S
v1_GRMZM2G061932_P01 4a53Zea mays6E-31138426012 (12)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ATS3(1) PLAT(1)
TargetP: Secreted (Class 1 C0.032; M0.027; S0.953; _0.065)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 190 aa (-cTP 133)
Molecular Weight 21.07 kDA(-cTP )
PI 6.69(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1213Detail       leaf [A. thaliana] total leaf tissue P3-StrepII complemented
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1614Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1618Detail        [A. thaliana] m48
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2004Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2209Detail       leaf [A. thaliana] total leaf tissue Clp P5 Trapst 10
2211Detail       leaf [A. thaliana] total leaf tissue Clp P5 Trapst 12
2214Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2224Detail       leaf [A. thaliana] total leaf tissue Clp P3 strep
2242Detail       seedlings [A. thaliana] total tissue gfs9
2260Detail       leaf [A. thaliana] stroma Clp wild-type
2261Detail       leaf [A. thaliana] stroma Clp clp trap
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2263Detail       leaf [A. thaliana] stroma Clp Clp C1 trap
2266Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2288Detail        [A. thaliana] Clp C1 WT
2289Detail        [A. thaliana] Clp C1 TRAP
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2307Detail        [A. thaliana] Clp C1 TRAP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 17151019(vacuole - suspension cell)
17660356(tonoplast (Brassica oleracea buds))
19546170(mature pollen grains)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
20166762(guard cells (Arabidopsis))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

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