PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G62165.1   AGAMOUS-like 42

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62165.2 11Arabidopsis thaliana2E-1532101001000 (0)_
AT5G62165.3 11Arabidopsis thaliana2E-1532101001000 (0)_
AT5G62165.10 11Arabidopsis thaliana6E-14021093930 (0)_
Os10g39130.1 7Oryza sativa2E-5922345650 (0)_
Os02g01355.1 7Oryza sativa1E-5322244650 (0)_
Os02g01365.1 7Oryza sativa6E-5017350750 (0)_
Zm00001eb403750_P003 agpv5Zea mays1E-6621849690 (0)_
Zm00001eb403750_P001 agpv5Zea mays1E-6621849690 (0)_
v1_GRMZM2G171365_P04 4a53Zea mays1E-6621849690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4326(2) K-box(1) Speriolin_C(2) SRF-TF(2) YabA(2)
TargetP: Cytoplasm (Class 2 C0.118; M0.227; S0.030; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 210 aa (-cTP 207)
Molecular Weight 24.67 kDA(-cTP )
PI 9.40(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help