PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G62080.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot.
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G07230.1 11Arabidopsis thaliana4E-319461750 (0)S
AT5G52160.1 11Arabidopsis thaliana2E-126543610 (0)S
Os08g43290.1 7Oryza sativa5E-085940620 (0)S
Os09g35700.1 7Oryza sativa8E-068435460 (0)S
GRMZM2G073377_P04 3.21Zea mays5E-066639480 (0)M
Zm00001eb319020_P001 agpv5Zea mays5E-066639480 (0)M
v1_GRMZM2G073377_P03 4a53Zea mays5E-066639480 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: EXS(1) Prolamin_like(1) Tryp_alpha_amyl(2)
TargetP: Secreted (Class 1 C0.018; M0.015; S0.984; _0.016)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 95 aa (-cTP 52)
Molecular Weight 9.78 kDA(-cTP )
PI 4.59(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help