PPDB

PPDB	The Plant Proteome Database

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AT5G61990.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G59900.1 11 Arabidopsis thaliana 1E-85 732 28 47 0 (0) M
AT4G19440.4 11 Arabidopsis thaliana 1E-84 709 28 45 0 (0) C
AT4G19440.3 11 Arabidopsis thaliana 1E-84 709 28 45 0 (0) C
Os07g20510.1 7 Oryza sativa 2E-138 929 31 50 0 (0) M
Os06g47570.1 7 Oryza sativa 8E-86 965 25 43 0 (0) C
Os02g57800.1 7 Oryza sativa 3E-84 755 27 46 0 (0) _
Zm00001eb190860_P001 agpv5 Zea mays 1E-95 715 27 49 0 (0) M
Zm00001eb190860_P003 agpv5 Zea mays 5E-94 904 26 45 0 (0) C
Zm00001eb190860_P002 agpv5 Zea mays 5E-94 904 26 45 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(6) ATP13(5) BKACE(2) Clathrin(3) COX5A(1) DED(2) DUF3368(3) ECSIT(3) Exog_C
TargetP:	Mitochondria (Class 1 C0.007; M0.877; S0.059; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	974 aa (-cTP 947)
Molecular Weight	108.81 kDA(-cTP )
PI	5.70(-cTP )

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data