PPDB

 The Plant Proteome Database

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AT5G61930.1   APO RNA-binding protein (DUF794)
Lab Annot. unknown function APO3 (DUF794)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61930.2 11Arabidopsis thaliana04021001001 (1)S
AT1G64810.1 11Arabidopsis thaliana2E-9536640631 (1)_
AT1G64810.2 11Arabidopsis thaliana3E-9536640631 (1)S
Os07g40920.1 7Oryza sativa3E-14436960730 (0)M
Os04g52520.1 7Oryza sativa7E-9634343651 (1)_
Os04g52520.3 7Oryza sativa6E-9333243661 (1)_
Zm00001eb244100_P001 agpv5Zea mays4E-15741855700 (0)M
GRMZM2G351454_P01 3.21Zea mays4E-15741855700 (0)M
GRMZM2G007453_P02 3.21Zea mays5E-10537243656 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: APO_RNA-bind(2)
TargetP: Secreted (Class 4 C0.034; M0.165; S0.501; _0.131)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 402 aa (-cTP 387)
Molecular Weight 45.91 kDA(-cTP )
PI 8.58(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help