PPDB

PPDB	The Plant Proteome Database

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AT5G61900.1 Calcium-dependent phospholipid-binding Copine family protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

TAIR curated location: plasma membrane11544183

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G61910.4 11 Arabidopsis thaliana 0 578 100 100 0 (0) _
AT5G61900.3 11 Arabidopsis thaliana 0 578 100 100 5 (5) _
AT5G07300.1 11 Arabidopsis thaliana 0 577 80 89 8 (8) _
Os02g32160.1 7 Oryza sativa 0 585 59 76 0 (0) _
Os05g30970.1 7 Oryza sativa 0 548 59 77 0 (0) _
Os01g68060.1 7 Oryza sativa 4E-20 300 30 44 0 (0) _
GRMZM2G494514_P01 3.21 Zea mays 0 442 61 79 0 (0) _
Zm00001eb285200_P001 agpv5 Zea mays 0 394 65 82 0 (0) _
v1_GRMZM2G494514_P01 4a53 Zea mays 0 379 63 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C2(2) Copine(1) vWA-TerF-like(1)
TargetP:	Cytoplasm (Class 3 C0.221; M0.077; S0.097; _0.720)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	578 aa (-cTP 523)
Molecular Weight	63.12 kDA(-cTP )
PI	5.66(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
429	Detail								leaf [A. thaliana]
430	Detail								[A. thaliana]
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
21533090(plasmodesmata-crude)
21173025(root proteome)

Comparative Proteomics Data