PPDB

The Plant Proteome Database

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AT5G61580.1   phosphofructokinase 4

Lab Annot. phosphofructokinase protein
Mapman: 4.4 glycolysis.PPFK
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61580.2 11Arabidopsis thaliana0530999930 (20)C
AT4G26270.1 11Arabidopsis thaliana0445748624 (7)_
AT5G56630.1 11Arabidopsis thaliana0437738568 (9)_
Os01g09570.1 7Oryza sativa044275870 (0)_
Os01g53680.1 7Oryza sativa0442748819 (19)_
Os05g44922.1 7Oryza sativa044273874 (4)_
Zm00001eb153830_P001 agpv5Zea mays044275870 (0)_
Zm00001eb153830_P002 agpv5Zea mays044275870 (0)_
GRMZM2G080375_P01 3.21Zea mays047870827 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DAGK_cat(1) PFK(1)
TargetP: Chloroplast (Class 2 C0.874; M0.019; S0.034; _0.269)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 530 aa (-cTP 476)
Molecular Weight 58.47 kDA(-cTP 52.36)
PI 8.46(-cTP 6.20)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
542Detail       leaf [A. thaliana] stroma (FPLC) >500 kDa (HMB) wild-type
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
2313Detail       leaf [A. thaliana] thylakoids thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

18814325(cotyledons)
19525416(leaf (wt and clpr4-1 mutant))
20423899(chloroplast)

Comparative Proteomics Data


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