PPDB

PPDB	The Plant Proteome Database

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AT5G61270.1 phytochrome-interacting factor7

Lab Annot.

basic helix-loop-helix (bHLH) DNA-binding protein
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G61270.3 11 Arabidopsis thaliana 0 278 100 100 0 (0) _
AT5G61270.2 11 Arabidopsis thaliana 0 278 100 100 0 (0) _
AT4G00050.1 11 Arabidopsis thaliana 6E-29 269 34 49 0 (0) _
Os02g56140.1 7 Oryza sativa 2E-21 98 51 66 0 (0) _
Os03g56950.3 7 Oryza sativa 3E-21 119 47 60 0 (0) _
Os03g56950.4 7 Oryza sativa 3E-21 119 47 60 0 (0) _
Zm00001eb023350_P005 agpv5 Zea mays 2E-24 202 42 53 0 (0) _
v1_GRMZM2G062458_P01 4a53 Zea mays 5E-24 194 42 54 0 (0) _
Zm00001eb023350_P004 agpv5 Zea mays 7E-24 203 41 52 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HAD_SAK_1(1) HLH(1) RNA_pol_Rbc25(1) Spt20(1) TTC5_OB(1)
TargetP:	Cytoplasm (Class 1 C0.089; M0.087; S0.047; _0.892)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	366 aa (-cTP 288)
Molecular Weight	40.83 kDA(-cTP )
PI	7.78(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data