PPDB

The Plant Proteome Database

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AT5G61270.1   phytochrome-interacting factor7

Lab Annot. basic helix-loop-helix (bHLH) DNA-binding protein
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61270.3 11Arabidopsis thaliana02781001000 (0)_
AT5G61270.2 11Arabidopsis thaliana02781001000 (0)_
AT4G00050.1 11Arabidopsis thaliana6E-2926934490 (0)_
Os02g56140.1 7Oryza sativa2E-219851660 (0)_
Os03g56950.3 7Oryza sativa3E-2111947600 (0)_
Os03g56950.4 7Oryza sativa3E-2111947600 (0)_
Zm00001eb023350_P005 agpv5Zea mays2E-2420242530 (0)_
v1_GRMZM2G062458_P01 4a53Zea mays5E-2419442540 (0)_
Zm00001eb023350_P004 agpv5Zea mays7E-2420341520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HAD_SAK_1(1) HLH(1) RNA_pol_Rbc25(1) Spt20(1) TTC5_OB(1)
TargetP: Cytoplasm (Class 1 C0.089; M0.087; S0.047; _0.892)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 366 aa (-cTP 288)
Molecular Weight 40.83 kDA(-cTP )
PI 7.78(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help