PPDB

 The Plant Proteome Database

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AT5G61220.1   LYR family of Fe/S cluster biogenesis protein
Lab Annot. LYR family of Fe/S cluster biogenesis protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61220.2 11Arabidopsis thaliana1E-59871001000 (0)M
AT5G61220.3 11Arabidopsis thaliana1E-59871001000 (0)M
Os08g14070.1 7Oryza sativa6E-248356692 (2)M
Os10g26640.1 7Oryza sativa1E-148355670 (0)M
Os03g15200.1 7Oryza sativa3E-096847600 (0)M
v1_GRMZM2G360429_P01 4a53Zea mays8E-248350677 (7)M
GRMZM2G360429_P01 3.21Zea mays8E-248350677 (7)M
Zm00001eb011200_P001 agpv5Zea mays8E-248350670 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Complex1_LYR(1) Complex1_LYR_1(1) Complex1_LYR_2(1)
TargetP: Mitochondria (Class 4 C0.143; M0.493; S0.052; _0.087)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 87 aa (-cTP 75)
Molecular Weight 10.11 kDA(-cTP )
PI 9.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1333Detail       leaf [A. thaliana] total tissue - Low-mass range wild-type
1334Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1351Detail       leaf [A. thaliana] total tissue t1-t2
1352Detail       leaf [A. thaliana] total tissue Prep1_Prep2
1353Detail       leaf [A. thaliana] total tissue Prep1_Prep2_t1
1356Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
1876Detail       Total leaf [A. thaliana] total soluble wild-type
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2044Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2050Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2053Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2120Detail       leaf [A. thaliana] Stroma stromacGep
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 20706207(cell cycle interactome (cell culture))

Comparative Proteomics Data

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