PPDB

PPDB	The Plant Proteome Database

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AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein

Lab Annot.

RRM and Zn finger Ran domain protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G61190.10 11 Arabidopsis thaliana 0 1010 98 98 0 (0) _
AT5G61190.6 11 Arabidopsis thaliana 0 1054 94 94 0 (0) _
AT5G61190.5 11 Arabidopsis thaliana 0 1057 94 94 0 (0) _
Os07g44320.1 7 Oryza sativa 3E-66 158 70 78 0 (0) _
Os03g25420.1 7 Oryza sativa 4E-42 150 58 68 0 (0) _
Os12g06560.1 7 Oryza sativa 1E-33 150 43 62 0 (0) M
Zm00001eb328720_P001 agpv5 Zea mays 7E-71 232 56 66 0 (0) _
Zm00001eb328720_P002 agpv5 Zea mays 3E-70 232 56 66 0 (0) _
Zm00001eb109990_P001 agpv5 Zea mays 1E-68 176 64 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	NYN(1) TUTase(5) zf-C2H2_2(5) zf-C2H2_9(3) zf-C2H2_jaz(4) zf-met(5) zf-U1(4)
TargetP:	Cytoplasm (Class 2 C0.070; M0.040; S0.145; _0.905)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	995 aa (-cTP 902)
Molecular Weight	111.10 kDA(-cTP )
PI	7.02(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
343	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
876	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)

Comparative Proteomics Data