PPDB

PPDB	The Plant Proteome Database

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AT5G61130.1 plasmodesmata callose-binding protein 1

Lab Annot.

plasmodesmatal callose binding protein (PDCB1)
Mapman: 35.1 not assigned.no ontology

Curated Location

TAIR curated location: cell wall (sensu Magnoliophyta) & anchored to membrane12068095,12805588,16287169

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G08000.1 11 Arabidopsis thaliana 7E-76 203 68 77 0 (0) S
AT5G08000.2 11 Arabidopsis thaliana 5E-73 198 65 74 0 (0) S
AT1G18650.1 11 Arabidopsis thaliana 3E-53 192 54 64 0 (0) S
Os03g54910.1 7 Oryza sativa 4E-37 108 50 72 0 (0) S
Os07g40940.1 7 Oryza sativa 9E-30 91 52 69 0 (0) S
Os01g55820.1 7 Oryza sativa 2E-27 96 48 70 0 (0) S
Zm00001eb214620_P001 agpv5 Zea mays 2E-35 110 50 69 0 (0) S
GRMZM2G088797_P01 3.21 Zea mays 2E-35 110 50 69 0 (0) S
GRMZM2G123714_P02 3.21 Zea mays 3E-32 93 53 70 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	X8(1)
TargetP:	Secreted (Class 3 C0.053; M0.107; S0.581; _0.067)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	201 aa (-cTP 178)
Molecular Weight	20.36 kDA(-cTP )
PI	7.47(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14517339(GPI anchored suspension cells)
16602701(GPI-anchored Plasma membrane suspension cells)
17317660(Plasma Membrane proteome)
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)

Comparative Proteomics Data