PPDB

The Plant Proteome Database

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AT5G61050.1   histone deacetylase-related / HD-like protein

Lab Annot.
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61060.1 11Arabidopsis thaliana3E-13023976860 (0)_
AT5G61060.2 11Arabidopsis thaliana3E-13023976860 (0)_
Os07g41090.1 7Oryza sativa1E-7723749670 (0)_
Os07g41090.3 7Oryza sativa3E-124461810 (0)_
Zm00001eb108570_P003 agpv5Zea mays7E-7522249670 (0)_
Zm00001eb108570_P001 agpv5Zea mays3E-7422249670 (0)_
GRMZM2G457889_P01 3.21Zea mays3E-7422249670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 1 C0.090; M0.081; S0.124; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 252 aa (-cTP 249)
Molecular Weight 27.94 kDA(-cTP )
PI 5.82(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help