PPDB

The Plant Proteome Database

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AT5G61030.1   glycine-rich RNA-binding protein 3

Lab Annot. ORRM3 (also named GR-RBP3)
Mapman: 27.1.5* RNA.processing.editing
Curated Location mitochondria (Pubmed: 25800738 )

TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61030.2 11Arabidopsis thaliana03091001000 (0)M
AT1G74230.1 11Arabidopsis thaliana3E-441186381132 (109)M
AT4G13850.3 11Arabidopsis thaliana3E-321225071116 (97)M
Os12g31800.1 7Oryza sativa4E-43120587723 (23)M
Os10g17454.3 7Oryza sativa2E-4211957771 (1)M
Os10g17454.2 7Oryza sativa3E-4111857772 (2)M
Zm00001eb138110_P003 agpv5Zea mays6E-4212056780 (0)M
Zm00001eb138110_P004 agpv5Zea mays1E-4112056780 (0)M
v1_GRMZM2G150521_P01 4a53Zea mays2E-41120567810 (10)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2263(1) RRM_1(1) RRM_7(1)
TargetP: Mitochondria (Class 4 C0.189; M0.406; S0.159; _0.080)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 309 aa (-cTP 274)
Molecular Weight 29.98 kDA(-cTP )
PI 4.87(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
17137349(ATP-binding-mitochondria cell suspension)
20018591(weak Cu-2+ binding (mitochondria - cell culture))
22060019(phosphoproteome - N-starved seedlings)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help