PPDB

 The Plant Proteome Database

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AT5G61020.1   evolutionarily conserved C-terminal region 3
Lab Annot. evolutionarily conserved C-terminal region 3
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61020.2 11Arabidopsis thaliana049599995 (1)_
AT3G03950.2 11Arabidopsis thaliana2E-12435655691 (0)_
AT3G03950.3 11Arabidopsis thaliana2E-12435655691 (0)_
Os03g53670.1 7Oryza sativa1E-11731857727 (7)_
Os03g53670.2 7Oryza sativa2E-11731857724 (4)_
Os07g07490.2 7Oryza sativa3E-11735054685 (5)_
Zm00001eb057150_P005 agpv5Zea mays3E-11536551670 (0)_
Zm00001eb057150_P003 agpv5Zea mays4E-11536551670 (0)_
GRMZM2G126338_P02 3.21Zea mays4E-11536551672 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3942(1) YTH(1)
TargetP: Cytoplasm (Class 2 C0.064; M0.103; S0.287; _0.906)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 495 aa (-cTP 474)
Molecular Weight 55.23 kDA(-cTP )
PI 8.22(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2301Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help