PPDB

PPDB	The Plant Proteome Database

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AT5G61000.1 Replication factor-A protein 1-like protein

Lab Annot.

Mapman: 27.1.2 RNA.processing.RNA helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G08020.1 11 Arabidopsis thaliana 0 630 81 88 0 (0) _
AT2G06510.1 11 Arabidopsis thaliana 9E-103 653 32 53 2 (2) _
AT2G06510.2 11 Arabidopsis thaliana 1E-100 622 32 54 2 (2) M
Os03g11540.1 7 Oryza sativa 0 624 64 79 0 (0) _
Os02g53680.1 7 Oryza sativa 8E-95 666 30 51 0 (0) _
Os05g02040.1 7 Oryza sativa 7E-83 466 34 56 0 (0) _
Zm00001eb008630_P002 agpv5 Zea mays 0 536 62 78 0 (0) S
GRMZM2G086934_P01 3.21 Zea mays 0 624 61 78 0 (0) _
Zm00001eb400180_P001 agpv5 Zea mays 0 624 61 78 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CDC24_OB3(1) DUF223(1) DUF5651(2) Rep-A_N(1) Rep_fac-A_C(2) REPA_OB_2(3) tRNA_an
TargetP:	Cytoplasm (Class 5 C0.568; M0.040; S0.118; _0.654)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	629 aa (-cTP 604)
Molecular Weight	70.26 kDA(-cTP )
PI	6.10(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data