PPDB

PPDB	The Plant Proteome Database

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AT5G60990.1 DEA(D/H)-box RNA helicase family protein

Lab Annot.

DEAD box RNA helicase (RH10)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G16280.1 11 Arabidopsis thaliana 1E-111 413 44 64 0 (0) _
AT4G16630.1 11 Arabidopsis thaliana 2E-77 379 37 55 0 (0) _
AT5G65900.1 11 Arabidopsis thaliana 2E-75 394 39 57 0 (0) _
Os03g46610.1 7 Oryza sativa 0 440 62 77 1 (1) _
Os03g46610.2 7 Oryza sativa 0 401 66 81 1 (1) _
Os07g46580.1 7 Oryza sativa 3E-179 424 58 74 0 (0) _
v1_GRMZM2G075027_P03 4a53 Zea mays 0 422 61 77 11 (11) _
Zm00001eb228070_P004 agpv5 Zea mays 0 422 61 77 0 (0) _
GRMZM2G075027_P03 3.21 Zea mays 0 422 61 77 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(1) ERCC3_RAD25_C(1) Helicase_C(1) ResIII(1)
TargetP:	Cytoplasm (Class 2 C0.171; M0.070; S0.101; _0.925)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	456 aa (-cTP 439)
Molecular Weight	51.15 kDA(-cTP )
PI	9.07(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1018	Detail								[aphid]

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data