PPDB

The Plant Proteome Database

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AT5G60960.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61370.1 11Arabidopsis thaliana8E-4344324460 (0)M
AT3G04130.1 11Arabidopsis thaliana4E-3643626460 (0)M
AT3G04130.2 11Arabidopsis thaliana4E-3643626460 (0)M
Os07g41260.1 7Oryza sativa2E-13245446622 (2)M
Os02g38950.1 7Oryza sativa4E-3939528460 (0)M
Os10g28640.1 7Oryza sativa2E-3640226465 (5)M
GRMZM2G021567_P03 3.21Zea mays2E-13042349667 (7)M
v1_GRMZM2G021567_P01 4a53Zea mays2E-130423496610 (10)M
v1_GRMZM2G021567_P03 4a53Zea mays2E-130423496610 (10)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Mtf2(2) PPR(8) PPR_1(8) PPR_2(6) PPR_3(4) PPR_long(3)
TargetP: Chloroplast (Class 5 C0.632; M0.631; S0.001; _0.006)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 521 aa (-cTP 461)
Molecular Weight 59.14 kDA(-cTP 52.44)
PI 9.41(-cTP 9.14)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
21311031(mitochondria)

Comparative Proteomics Data


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