PPDB

PPDB	The Plant Proteome Database

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AT5G60820.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G08139.1 11 Arabidopsis thaliana 4E-77 374 46 59 0 (0) _
AT5G08139.2 11 Arabidopsis thaliana 5E-36 283 43 55 0 (0) _
AT3G02340.1 11 Arabidopsis thaliana 1E-26 153 41 60 0 (0) _
Os11g02670.1 7 Oryza sativa 6E-23 142 40 54 0 (0) _
Os12g02620.1 7 Oryza sativa 2E-22 142 39 52 0 (0) _
Os10g34590.1 7 Oryza sativa 8E-20 126 38 53 5 (5) M
v1_GRMZM2G466823_P01 4a53 Zea mays 3E-20 119 41 57 0 (0) _
Zm00001eb195510_P001 agpv5 Zea mays 3E-20 119 41 57 0 (0) _
GRMZM5G886096_P01 3.21 Zea mays 3E-20 119 41 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Nop25(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-rbx1(1) zf-RIN
TargetP:	Cytoplasm (Class 3 C0.074; M0.202; S0.177; _0.748)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	419 aa (-cTP 403)
Molecular Weight	47.70 kDA(-cTP )
PI	3.89(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data